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EEDFP Research Project

A hub for all research pertaining to Eco-Evolutionary Dynamics of Fluctuating Populations

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A modified next reaction method for simulating chemical systems with time dependent propensities and delays

11th May 2022 by Matthew Asker

Abstract: Chemical reaction systems with a low to moderate number of molecules are typically modeled as discrete jump Markov processes. These systems are oftentimes simulated with methods that produce statistically exact sample paths such as … Read more

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Efficient Exact Stochastic Simulation of Chemical Systems with Many Species and Many Channels

11th May 2022 by Matthew Asker

Abstract: There are two fundamental ways to view coupled systems of chemical equations: as continuous, represented by differential equations whose variables are concentrations, or as discrete, represented by stochastic processes whose variables are numbers of … Read more

Categories Code, Relevant Papers
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  • About
  • Relevant Papers
    • Spatial models
    • Well-mixed models
    • Experimental Work
  • Code
  • Seminars & Talks
  • Publications & Preprints
  • People