Code – EEDFP Research Project

A modified next reaction method for simulating chemical systems with time dependent propensities and delays

11th May 2022 by Matthew Asker

Abstract: Chemical reaction systems with a low to moderate number of molecules are typically modeled as discrete jump Markov processes. These systems are oftentimes simulated with methods that produce statistically exact sample paths such as … Read more

Efficient Exact Stochastic Simulation of Chemical Systems with Many Species and Many Channels

11th May 2022 by Matthew Asker

Abstract: There are two fundamental ways to view coupled systems of chemical equations: as continuous, represented by differential equations whose variables are concentrations, or as discrete, represented by stochastic processes whose variables are numbers of … Read more